Underwater Species Tracker and Counter

This module takes an underwater video from DUSIA dataset as the input and outputs a labeled video, counts, and annotations.

This page describes how one can run the BisQue Module named SpeciesTrackerAndCounter

Run Instructions

This module takes in a video and generates outputs a labeled video, counts, and annotations for YOLO and CVAT.

Navigate to Module Page

Login >> Analyze >> SpeciesTrackerAndCounter

Expected Inputs

• DUSIA under water videos (e.g. example.mp4)

Expected Outputs

• Videos with detection, track, and counts labels (example_output.mp4)

• Species counts table (example_count.hdf5)

• YOLO Annotation file (YOLO_example_annotations.txt)

• CVAT Annotation file (CVAT_example_annotations.xml)

Instructions on Using The Module

Uploading Output Annotation files to CVAT

1. Download CVAT Annotation File from the module outputs

1. Open CVAT and upload the same video

2. In the Actions drop-down menu, select Upload annotations (Please make sure to delete any existing annotations on CVAT)

1. Choose CVAT 1.1 and drag the downloaded CVAT annotation file

1. Now visualize the predictions and fix them